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  Chromosome 1 - RH Maps - Single Contig
 

Chromosome 1 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_004350 NT_004321 NT_004547 NT_034374 NT_022058 NT_021917 NT_028054 NT_032967
NT_021937 NT_034375 NT_022041 NT_004873 NT_034376 NT_030584 NT_004572 NT_029218
NT_004610 NT_032979 NT_004391 NT_034377 NT_030571 NT_004782 NT_028053 NT_034378
NT_004538 NT_034379 NT_034380 NT_004511 NT_004852 NT_032963 NT_032971 NT_032972
NT_004386 NT_032977 NT_004424 NT_032973 NT_029223 NT_029865 NT_031737 NT_004636
NT_034381 NT_032948 NT_034382 NT_004464 NT_034383 NT_034384 NT_004483 NT_032974
NT_004902 NT_034385 NT_026943 NT_034386 NT_029231 NT_034387 NT_004658 NT_004686
NT_034388 NT_021979 NT_034389 NT_034390 NT_034391 NT_030565 NT_034392 NT_034393
NT_028050 NT_030567 NT_034394 NT_021977 NT_034395 NT_029860 NT_019273 NT_034396
NT_031697 NT_004754 NT_032975 NT_022052 NT_034397 NT_022071 NT_004434 NT_034398
NT_034399 NT_034400 NT_034401 NT_034402 NT_034403 NT_032962 NT_034428 NT_021907
NT_004441 NT_030577 NT_004858 NT_004982 NT_026945 NT_004668 NT_034404 NT_034405
NT_029874 NT_034406 NT_004487 NT_021905 NT_004599 NT_034407 NT_004671 NT_004416
NT_029862 NT_034408 NT_034409 NT_034410 NT_034411 NT_032947 NT_029226 NT_021877
NT_031718 NT_034412 NT_034413 NT_004612 NT_034414 NT_034415 NT_021953 NT_004861
NT_004525 NT_004908 NT_004559 NT_031728 NT_021973 NT_004753 NT_004433 NT_034416
NT_030561 NT_034417 NT_004836 NT_004771 NT_004734 NT_031700 NT_004536 NT_032964
NT_031730 NT_029870 NT_032969 NT_032968 NT_034418


  NT_032972
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_032972AL390776445038683RH34536  12381.00  1 AC023953.2, AL390776.16
S/G/Y/R/B/O NT_032972AL390776445244333RH6563315318.78    1 AC004254.1, AC023953.2, AL390776.16
S/G/Y/R/B/O NT_032972AL359373445636303          
S/G/Y/R/B/O NT_032972AL596225447768473WI-19393    1152.301 AC016328.3, AC019268.4, AL355883.3, AL596225.11
S/G/Y/R/B/O NT_032972AL596225447768473RH500631130.08    1 AC016328.3, AC019268.4, AL355883.3, AL596225.11
S/G/Y/R/B/O NT_032972AL122004448283213RH693451129.79    1 AC011168.4, AC016328.3, AC019268.4, AL122004.17
S/G/Y/R/B/O NT_032972AL122004448441753RH786081130.08    1 AC011168.4, AC016328.3, AC019268.4, AL122004.17
S/G/Y/R/B/O NT_032972AL122004448444043RH639011140.76  1152.801 AC011168.4, AC016328.3, AC019268.4, AL122004.17
S/G/Y/R/B/O NT_032972AL122004448445353RH645331140.86    1 AC011168.4, AC016328.3, AC019268.4, AL122004.17
S/G/Y/R/B/O NT_032972AL122004448445623RH417921133.01    1 AC011168.4, AC016328.3, AC019268.4, AL122004.17
S/G/Y/R/B/O NT_032972AL122004448469313RH658691131.85    1 AC019268.4, AL122004.17
S/G/Y/R/B/O NT_032972AL122004448472563RH126891142.13    1 AC019268.4, AL122004.17
S/G/Y/R/B/O NT_032972AL122004448472883WI-18517    1152.801 AC019268.4, AL122004.17
S/G/Y/R/B/O NT_032972AL122004448472883RH505651130.91    1 AC019268.4, AL122004.17
S/G/Y/R/B/O NT_032972AL122004448475863RH754721127.56    1 AC019268.4, AL122004.17
S/G/Y/R/B/O NT_032972AL122004448817623RH458201142.50    1 AL122004.17
S/G/Y/R/B/O NT_032972AL122004448938523RH983871140.76    1 AL122004.17
S/G/Y/R/B/O NT_032972AL592166449602753RH759031142.93    1 AL592166.15, AL611928.7
S/G/Y/R/B/O NT_032972AL592166449603823RH678811130.08    1 AL592166.15, AL611928.7
S/G/Y/R/B/O NT_032972AL592166449712433WI-1404    1152.801 AL592166.15, AL611928.7
S/G/Y/R/B/O NT_032972AL592166449712433RH507021132.59    1 AL592166.15, AL611928.7
S/G/Y/R/B/O NT_032972AL592166449840543D1S421    1152.801 AL592166.15, AL611928.7
S/G/Y/R/B/O NT_032972AL592166449986643RH706771140.97    1 AL592166.15, AL611928.7
S/G/Y/R/B/O NT_032972AL592166450131573RH1026611130.18    1 AL592166.15, AL611928.7
S/G/Y/R/B/O NT_032972AL136380450438593WI-14181    1152.801 AL136380.22, AL355991.5, AL611928.7
S/G/Y/R/B/O NT_032972AL136380450438593RH644521131.54    1 AL136380.22, AL355991.5, AL611928.7
S/G/Y/R/B/O NT_032972AL359473451955733RH258201132.38    1 AL359473.22
S/G/Y/R/B/O NT_032972AL359473452083753RH788941131.43    1 AL359473.22
S/G/Y/R/B/O NT_032972AL359473452083993RH176621130.08    1 AL359473.22
S/G/Y/R/B/O NT_032972AL359473452084433WI-18590    1152.801 AL359473.22
S/G/Y/R/B/O NT_032972AL359473452084433RH506631129.98    1 AL359473.22
S/G/Y/R/B/O NT_032972AL359473452095533RH990991129.98    1 AL359473.22
S/G/Y/R/B/O NT_032972AL592294453331152TIGR-A004V29    1152.801 AC015534.6, AC026857.2, AL390915.8, AL391596.3, AL391664.6, AL592294.15
S/G/Y/R/B/O NT_032972AL592294453331152RH504291132.23    1 AC015534.6, AC026857.2, AL390915.8, AL391596.3, AL391664.6, AL592294.15
S/G/Y/R/B/O NT_032972AL592294454014502RH499151142.93    1 AL391596.3, AL391664.6, AL592294.15
S/G/Y/R/B/O NT_032972AL592294454014502WI-21196    1169.601 AL391596.3, AL391664.6, AL592294.15
S/G/Y/R/B/O NT_032972AL592294454023462RH462731142.50    1 AL391596.3, AL391664.6, AL592294.15
S/G/Y/R/B/O NT_032972AL645758454402473          
S/G/Y/R/B/O NT_032972AL359540454846033RH930  12434.00  1 AL359540.19
S/G/Y/R/B/O NT_032972AL359540455194253RH31566  12444.00  1 AL359540.19
S/G/Y/R/B/O NT_032972AL359540455366843RH182951130.29    1 AL359540.19
S/G/Y/R/B/O NT_032972AL359540455369013RH686521130.39    1 AL359540.19
S/G/Y/R/B/O NT_032972AL359540455369173SGC31961    1169.601 AL359540.19
S/G/Y/R/B/O NT_032972AL451136456869463RH1190  12454.00  1 AC025492.4, AL356673.5, AL451136.11
S/G/Y/R/B/O NT_032972AL451136456870913RH471661142.50    1 AC025492.4, AL356673.5, AL451136.11
S/G/Y/R/B/O NT_032972AL451136457031143RH479841142.50    1 AC025492.4, AL356673.5
S/G/Y/R/B/O NT_032972AL451136457036223RH32759  12440.00  1 AC025492.4, AL356673.5, AL451136.11
S/G/Y/R/B/O NT_032972AL451136457037583RH696511130.39    1 AC025492.4, AL356673.5, AL451136.11
S/G/Y/R/B/O NT_032972AL451136457040663RH13960  12438.00  1 AC025492.4, AL356673.5, AL451136.11
S/G/Y/R/B/O NT_032972AL451136457041073RH263571130.49    1 AC025492.4, AL356673.5, AL451136.11


  NT_032972 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_032972AL451136457119513RH70158953.75    2 AC025492.4, AL356673.5, AL451136.11
S/G/Y/R/B/O NT_032972AL355480457440193RH487281143.46    1 AC025492.4, AL355480.22, AL356673.5
S/G/Y/R/B/O NT_032972AL355480458130593RH767381130.70    1 AL355480.22
S/G/Y/R/B/O NT_032972AL355480458130633RH697281131.50    1 AL355480.22
S/G/Y/R/B/O NT_032972AL604028458205103RH8593  12438.00  1 AL604028.14
S/G/Y/R/B/O NT_032972AL604028458205103RH647671130.39    1 AL604028.14
S/G/Y/R/B/O NT_032972AL604028458212963RH126671142.61    1 AL604028.14
S/G/Y/R/B/O NT_032972AL604028458406303RH454551142.50    1 AL604028.14
S/G/Y/R/B/O NT_032972AL604028458424733RH643381143.20  1153.701 AL604028.14
S/G/Y/R/B/O NT_032972AL603882458867353RH14622  12437.00  1 AL603882.12
S/G/Y/R/B/O NT_032972 - RH118291139.41    0 AL355801.9, AL513331.15
S/G/Y/R/B/O NT_032972 - RH1860  12378.00  1 AL356793.19
S/G/Y/R/B/O NT_032972 - RH158561141.46    1 AC024511.5, AL137853.12, AL713993.4
S/G/Y/R/B/O NT_032972 - RH32343  12454.00  1 AC024468.3, AL592207.9, AL683889.14
S/G/Y/R/B/O NT_032972 - RH258831139.72    1 AC124780.1, AL512599.31
S/G/Y/R/B/O NT_032972 - RH32897  12440.00  1 AL358794.19
S/G/Y/R/B/O NT_032972 - RH259111139.41    0 AL355801.9, AL513331.15
S/G/Y/R/B/O NT_032972 - RH270971139.82    0  
S/G/Y/R/B/O NT_032972 - RH462621142.19    1 AC023038.2, AC114493.1, AL137791.19, AL356780.7
S/G/Y/R/B/O NT_032972 - RH465961139.51    1 AL050341.18
S/G/Y/R/B/O NT_032972 - RH469551142.93    1 AC005392.1
S/G/Y/R/B/O NT_032972 - RH496081139.62    1 AC022557.22, AC023225.3, AC104336.2, AL513473.4
S/G/Y/R/B/O NT_032972 - RH643481140.03    1 AL034379.8, AL355880.7
S/G/Y/R/B/O NT_032972 - RH643291141.67    0 AL355801.9, AL513331.15
S/G/Y/R/B/O NT_032972 - RH644151141.18    1 AL034379.8, AL355880.7
S/G/Y/R/B/O NT_032972 - RH642411143.35    2 AL137158.7, AL139147.6, AL603790.19
S/G/Y/R/B/O NT_032972 - RH702201142.72    0  
S/G/Y/R/B/O NT_032972 - RH704671142.82    1 AC098484.2
S/G/Y/R/B/O NT_032972 - RH712461143.04    0  
S/G/Y/R/B/O NT_032972 - RH713421142.50    0  
S/G/Y/R/B/O NT_032972 - RH713941142.82    0 AC016521.4, AC022182.8
S/G/Y/R/B/O NT_032972 - RH780331143.46    0  
S/G/Y/R/B/O NT_032972 - RH799521141.56    1 AL162262.9, AL606484.9, AL663046.4
S/G/Y/R/B/O NT_032972 - RH986431142.61    0